TempLattice.h

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// # TempLattice.h: A Lattice that can be used for temporary storage
// # Copyright (C) 1997,1998,1999,2000,2003
// # Associated Universities, Inc. Washington DC, USA.
// #
// # This library is free software; you can redistribute it and/or modify it
// # under the terms of the GNU Library General Public License as published by
// # the Free Software Foundation; either version 2 of the License, or (at your
// # option) any later version.
// #
// # This library is distributed in the hope that it will be useful, but WITHOUT
// # ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
// # FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Library General Public
// # License for more details.
// #
// # You should have received a copy of the GNU Library General Public License
// # along with this library; if not, write to the Free Software Foundation,
// # Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
// #
// # Correspondence concerning AIPS++ should be addressed as follows:
// #        Internet email: casa-feedback@nrao.edu.
// #        Postal address: AIPS++ Project Office
// #                        National Radio Astronomy Observatory
// #                        520 Edgemont Road
// #                        Charlottesville, VA 22903-2475 USA
 
#ifndef LATTICES_TEMPLATTICE_H
#define LATTICES_TEMPLATTICE_H
 
// # Includes
#include <casacore/casa/aips.h>
#include <casacore/lattices/Lattices/TempLatticeImpl.h>
#include <memory>
 
namespace casacore {  // # NAMESPACE CASACORE - BEGIN
 
// <summary>
// A Lattice that can be used for temporary storage
// </summary>
 
// <use visibility=export>
 
// <reviewed reviewer="Peter Barnes" date="1999/10/30" tests="tTempLattice.cc" demos="">
// </reviewed>
 
// <prerequisite>
//   <li> <linkto class="Lattice">Lattice</linkto>
//   <li> <linkto class="ArrayLattice">ArrayLattice</linkto>
//   <li> <linkto class="PagedArray">PagedArray</linkto>
// </prerequisite>
 
// <etymology>
// A TempLattice disappears from both memory and disk when it goes out of
// scope. Hence it is only useful for temporary storage of data.
// </etymology>
 
// <synopsis>
// Lattice classes are designed to allow the memory-efficient handling of large
// amounts of data. But they can also used with much smaller arrays. With
// large amounts of data the <linkto class="PagedArray">PagedArray</linkto>
// class should be used, as this will store the data on disk and efficiently
// access specified portions of the data on request. With small amounts of
// data the <linkto class="ArrayLattice">ArrayLattice</linkto> class should be
// used as all the data is always in memory avoiding the I/O associated with
// PagedArrays.
// <p>
// Applications often cannot predict until run time whether they will
// be dealing with a large or small amount of data. So the use of a
// PagedArray or an ArrayLattice cannot be made until the size of the arrays
// are known. TempLattice makes this decision given the size of the Array. To
// help in making a good choice the TempLattice class also examines how much
// memory the operating system has (using an aipsrc variable) and compares
// it with the size of the requested Array.
// <p>
// The algorithm currently used is: create an ArrayLattice if the size of the
// array is less than a quarter of the total system memory; otherwise a
// PagedArray is created. The PagedArray is stored in the current
// working directory and given a unique name that contains the string
// "pagedArray". This pagedArray will be deleted once the TempLattice goes out
// of scope. So unlike PagedArrays which can be made to exist longer than the
// time they are used by a process, the PagedArrays created by the
// TempLattice class are always scratch arrays.
// <p>
// It is possible to temporarily close a TempLattice, which only takes effect
// when it is created as a PagedArray. In this way it is possible to reduce
// the number of open files in case a lot of TempLattice objects are used.
// A temporarily closed TempLattice will be reopened automatically when needed.
// It can also be reopened explicitly.
// <p>
// You can force the TempLattice to be disk based by setting the memory
// argument in the constructors to 0
// <p>
// TempLattice is implemented using TempLatticeImpl for reasons explained
// in that class.
// </synopsis>
 
// <example>
// <srcblock>
//  // Create a temporary lattice and initialize to 0.
//  TempLattice<Float> myLat (IPosition(2,1024,1024));
//  myLat.set (0.);
//  // Temporarily close the lattice.
//  myLat.tempClose();
//  // Do an operation, which will automatically reopen the lattice.
//  myLat.set (1.);
//  // Note that the destructor deletes the table (if the TempLattice
//  // was created on disk).
// </srcblock>
// </example>
 
// <motivation>
// I needed a temporary Lattice when converting the Convolver class to using
// Lattices. This was to store the Transfer function.
// </motivation>
 
// <templating arg=T>
//  <li> Any type that can be used by the Lattices can also be used by
//       this class.
// </templating>
 
// # <todo asof="yyyy/mm/dd">
// #   <li> add this feature
// #   <li> fix this bug
// #   <li> start discussion of this possible extension
// # </todo>
 
template <class T>
class TempLattice : public Lattice<T> {
 public:
  // The default constructor creates a TempLattice containing a
  // default ArrayLattice object.
  TempLattice() : itsImpl(new TempLatticeImpl<T>()) {}
 
  // Create a TempLattice of the specified shape. You can specify how much
  // memory the Lattice can consume before it becomes disk based by giving a
  // non-negative value to the maxMemoryInMB argument. Otherwise it will assume
  // it can use up to 25% of the memory on your machine as defined in aipsrc
  // (this algorithm may change). Setting maxMemoryInMB to zero will force
  // the lattice to disk.
  // <group>
  explicit TempLattice(const TiledShape& shape, Int maxMemoryInMB = -1)
      : itsImpl(new TempLatticeImpl<T>(shape, maxMemoryInMB)) {}
  TempLattice(const TiledShape& shape, Double maxMemoryInMB)
      : itsImpl(new TempLatticeImpl<T>(shape, maxMemoryInMB)) {}
  // </group>
 
  // The copy constructor uses reference semantics. ie modifying data in the
  // copied TempLattice also modifies the data in the original TempLattice.
  // Passing by value doesn't make sense, because it may require the creation
  // of a temporary (but possibly huge) file on disk.
  TempLattice(const TempLattice<T>& other) : Lattice<T>(other), itsImpl(other.itsImpl) {}
 
  // The destructor removes the Lattice from memory and if necessary disk.
  virtual ~TempLattice();
 
  // The assignment operator with reference semantics. As with the copy
  // constructor assigning by value does not make sense.
  TempLattice<T>& operator=(const TempLattice<T>& other) { itsImpl = other.itsImpl; }
 
  // Make a copy of the object (reference semantics).
  virtual Lattice<T>* clone() const;
 
  // Is the TempLattice paged to disk?
  virtual Bool isPaged() const;
 
  // Can the lattice data be referenced as an array section?
  virtual Bool canReferenceArray() const;
 
  // Is the TempLattice writable? It should be.
  virtual Bool isWritable() const;
 
  // Flush the data.
  virtual void flush();
 
  // Close the Lattice temporarily (if it is paged to disk).
  // It'll be reopened automatically when needed or when
  // <src>reopen</src> is called explicitly.
  virtual void tempClose();
 
  // If needed, reopen a temporarily closed TempLattice.
  virtual void reopen();
 
  // Return the shape of the Lattice including all degenerate axes.
  // (ie. axes with a length of one)
  virtual IPosition shape() const;
 
  // Set all of the elements in the Lattice to the given value.
  virtual void set(const T& value);
 
  // Replace every element, x, of the Lattice with the result of f(x).  You
  // must pass in the address of the function -- so the function must be
  // declared and defined in the scope of your program.  All versions of
  // apply require a function that accepts a single argument of type T (the
  // Lattice template type) and return a result of the same type.  The first
  // apply expects a function with an argument passed by value; the second
  // expects the argument to be passed by const reference; the third
  // requires an instance of the class <src>Functional<T,T></src>.  The
  // first form ought to run faster for the built-in types, which may be an
  // issue for large Lattices stored in memory, where disk access is not an
  // issue.
  // <group>
  virtual void apply(T (*function)(T));
  virtual void apply(T (*function)(const T&));
  virtual void apply(const Functional<T, T>& function);
  // </group>
 
  // This function returns the recommended maximum number of pixels to
  // include in the cursor of an iterator.
  virtual uInt advisedMaxPixels() const;
 
  // Get the best cursor shape.
  virtual IPosition doNiceCursorShape(uInt maxPixels) const;
 
  // Maximum size - not necessarily all used. In pixels.
  virtual uInt maximumCacheSize() const;
 
  // Set the maximum (allowed) cache size as indicated.
  virtual void setMaximumCacheSize(uInt howManyPixels);
 
  // Set the cache size as to "fit" the indicated path.
  virtual void setCacheSizeFromPath(const IPosition& sliceShape, const IPosition& windowStart,
                                    const IPosition& windowLength, const IPosition& axisPath);
 
  // Set the actual cache size for this Array to be be big enough for the
  // indicated number of tiles. This cache is not shared with PagedArrays
  // in other rows and is always clipped to be less than the maximum value
  // set using the setMaximumCacheSize member function.
  // tiles. Tiles are cached using a first in first out algorithm.
  virtual void setCacheSizeInTiles(uInt howManyTiles);
 
  // Clears and frees up the caches, but the maximum allowed cache size is
  // unchanged from when setCacheSize was called
  virtual void clearCache();
 
  // Report on cache success.
  virtual void showCacheStatistics(std::ostream& os) const;
 
  // Get or put a single element in the lattice.
  // Note that Lattice::operator() can also be used to get a single element.
  // <group>
  virtual T getAt(const IPosition& where) const;
  virtual void putAt(const T& value, const IPosition& where);
  // </group>
 
  // Check class internals - used for debugging. Should always return True
  virtual Bool ok() const;
 
  // This function is used by the LatticeIterator class to generate an
  // iterator of the correct type for this Lattice. Not recommended
  // for general use.
  virtual LatticeIterInterface<T>* makeIter(const LatticeNavigator& navigator, Bool useRef) const;
 
  // Do the actual getting of an array of values.
  virtual Bool doGetSlice(Array<T>& buffer, const Slicer& section);
 
  // Do the actual getting of an array of values.
  virtual void doPutSlice(const Array<T>& sourceBuffer, const IPosition& where,
                          const IPosition& stride);
 
 private:
  std::shared_ptr<TempLatticeImpl<T>> itsImpl;
};
 
}  // namespace casacore
 
#ifndef CASACORE_NO_AUTO_TEMPLATES
#include <casacore/lattices/Lattices/TempLattice.tcc>
#endif  // # CASACORE_NO_AUTO_TEMPLATES
#endif